Author

James Holland Jones

Stanford UniversityORCID 0000-0003-1680-6757Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:non-human primate· 1

Frequent Co-Authors

Anupama ShankariD· 1 shared Colin A. ChapmaniD· 1 shared David Hyeroba· 1 shared Geeta N. EickiD· 1 shared Geoffrey Weny· 1 shared Huiyuan ZhengiD· 1 shared Kirstin N. SterneriD· 1 shared Marcus William FeldmaniD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Anupama ShankarORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintApr 14, 2020

Adaptive social contact rates induce complex dynamics during epidemics

Ronan F. Arthur, James Holland Jones, Matthew H. Bonds…·Marcus William Feldman

This paper develops a model of adaptive social contact rates during epidemics, showing complex dynamics including oscillations and multiple peaks under parameter changes.

2 citations

statistical model

𝕏 PostBluesky

GenomicsGenome Biology and EvolutionPeer-reviewedMay 9, 2019

Genome-wide patterns of gene expression in a wild primate indicate species-specific mechanisms associated with tolerance to natural simian immunodeficiency virus infection

Noah D. Simons, Geeta N. Eick, María José Ruiz‐López…·Nelson Ting

The paper analyzes gene expression in wild Ugandan red colobus to show SIV infection does not cause chronic immune activation and identifies upregulation of CD101 as a potential tolerance mechanism.

10 citations

non-human primatebulk RNA-seq

𝕏 PostBluesky