Author

Hector Rodríguez‐Pérez

Universidad de La LagunaORCID 0000-0003-1777-9084Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:genome assembly· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:clustering· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1

Frequent Co-Authors

Carlos FloresiD· 3 shared Jose Miguel Lorenzo-SalazariD· 2 shared Tamara Hernández-BeeftinkiD· 2 shared Ana Díaz-de UseraiD· 1 shared Carlos J. Pérez-GonzáleziD· 1 shared Fabián Lorenzo-DíaziD· 1 shared José Luis Roda GarcíaiD· 1 shared Laura CiuffredaiD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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3 shared papersBioinformatics

Carlos FloresORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedOct 5, 2020

NanoCLUST: a species-level analysis of 16S rRNA nanopore sequencing data

Hector Rodríguez‐Pérez, Laura Ciuffreda, Carlos Flores

NanoCLUST improves species-level bacterial identification and abundance estimation using 16S rRNA nanopore sequencing data compared to existing methods.

144 citationstop 2%

long-read sequencingstatistical model

𝕏 PostBluesky

BioinformaticsBMC BioinformaticsPeer-reviewedMay 9, 2019

NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly

Hector Rodríguez‐Pérez, Tamara Hernández-Beeftink, Jose Miguel Lorenzo-Salazar…·Carlos Flores

3 citations

whole-genome sequencingexperimental assay

𝕏 PostBluesky

GenomicsbioRxivPreprintDec 4, 2018

Shallow MinION sequencing to assist de novo assembly of the Streptococcus agalactiae genome

Tamara Hernández-Beeftink, Hector Rodríguez‐Pérez, Ana Díaz-de Usera…·Carlos Flores

The paper uses shallow MinION sequencing combined with Illumina short-read data to improve genome assembly of Streptococcus agalactiae.

DOI 10.1101/485029

bacteria (other)whole-genome sequencing

𝕏 PostBluesky