Author

Alvaro Donayre

Northwestern UniversityORCID 0000-0003-1877-0655Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:flow cytometry· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Alexander V. MishariniD· 2 shared Anna E. PawlowskiiD· 2 shared Benjamin David SingeriD· 2 shared Catherine A. GaoiD· 2 shared Chiagozie Ifeoma PickensiD· 2 shared G. R. Scott BudingeriD· 2 shared Helen K. DonnellyiD· 2 shared Hiam Abdala‐ValenciaiD· 2 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersImmunology

Alexander V. MisharinORCID

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintMay 14, 2026

Pathogen-specific host responses define distinct pneumonia endotypes in the human lung

Nikolay S. Markov, Marcin Możejko, Vijeeth Guggilla…·The NU SCRIPT Study Investigators

This study identifies distinct pneumonia endotypes based on pathogen-specific host responses in the lung, linking them to clinical outcomes and suggesting personalized treatment strategies.

2 citations

humanscRNA-seq

𝕏 PostBluesky

Systems BiologyNature ImmunologyPeer-reviewedAug 13, 2024

A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia

Nikolay S. Markov, Ziyou Ren, Karolina J. Senkow…·Karen M. Ridge

The paper examines alveolar T cell responses in SARS-CoV-2 pneumonia patients, finding that early interferon signaling and targeting of structural proteins correlate with better clinical outcomes.

17 citationstop 3%

humanbulk RNA-seq

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