Author

James Eugene Koltes

Iowa State UniversityORCID 0000-0003-1897-5685Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Assay:ChIP-seq· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Organism:bacteria (other)· 1 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

Brenda M. MurdochiD· 2 shared Honglin JiangiD· 2 shared Huaijun ZhouiD· 2 shared Jennifer J. MichaliD· 2 shared Monique RijnkelsiD· 2 shared Pablo J. RossiD· 2 shared Sarah L. Corum· 2 shared Timothy P. L. SmithiD· 2 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Brenda M. MurdochORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintAug 21, 2025

An integrated multi-tissue atlas of epigenomic landscapes and regulatory elements in the bovine genome

Dailu Guan, Jennifer Jéssica Bruscadin, Wen Yang…·Huaijun Zhou

The paper constructs a bovine epigenomic atlas to annotate regulatory elements and decode the regulatory syntax of the cattle genome, aiding in fine-mapping GWAS loci for complex traits.

3 citations

DNA methylationChIP-seq

𝕏 PostBluesky

GenomicsG3 Genes Genomes GeneticsPeer-reviewedDec 13, 2023

Genomic loci involved in sensing environmental cues and metabolism affect seasonal coat shedding in Bos taurus and Bos indicus cattle

Harly J. Durbin, Helen Yampara-Iquise, Troy N. Rowan…·Jared E. Decker

The paper identifies genomic loci influencing seasonal coat shedding in cattle by analyzing large-scale phenotypic and genetic data, finding strong associations with metabolism and light-sensing genes.

2 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 5, 2022

Functional genomics of cattle through integration of multi-omics data

Hamid Beiki, Brenda M. Murdoch, Carissa A. Park…·James Mark Reecy

The paper improves bovine genome annotation by integrating multi-omics data to identify novel transcripts and gene functions, and constructs a trait similarity network.

4 citations

long-read sequencingbulk RNA-seq

𝕏 PostBluesky