Author

Alexey V. Rakov

Far Eastern Federal UniversityORCID 0000-0003-1917-9189Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:DNA methylation· 1 Assay:protein sequence· 1 Research Focus:protein structure prediction· 1 Research Focus:software / tool· 1 Research Focus:variant effect prediction· 1 Organism:virus· 1

Frequent Co-Authors

Emilio MastrianiiD· 2 shared Dieter M. SchifferliiD· 1 shared Shu-Lin LiuiD· 1 shared Shu‐Lin LiuiD· 1 shared

Activity by Year

2020-2020 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

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2 shared papersGenomics

Emilio MastrianiORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintNov 12, 2020

An evolutionary analysis of the SARS-CoV-2 genomes from the countries in the same meridian

Emilio Mastriani, Alexey V. Rakov, Shu‐Lin Liu

The paper analyzes SARS-CoV-2 genomes from four countries in the same meridian to identify evolutionary pressures and functional implications of a specific codon mutation.

DOI 10.1101/2020.11.12.380816

viruswhole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMar 26, 2020

HamHeat: A fast and simple package for calculating Hamming distance from multiple sequence data for heatmap visualization

Alexey V. Rakov, Dieter M. Schifferli, Shu-Lin Liu, Emilio Mastriani

HamHeat calculates Hamming distances for multiple sequence alignments to generate heatmaps efficiently.

1 citation

protein sequenceDNA methylation

𝕏 PostBluesky