Author

David Bryant

University of OtagoORCID 0000-0003-1963-5535Unclaimed ORCID profile · follow to get notified of new preprints

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David Bryant2 papers

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:phylogenetics / evolution· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alex GavryushkiniD· 1 shared Banu Cetinkaya· 1 shared Caner BağcıiD· 1 shared Daniel H. HusoniD· 1 shared Kieran ElmesiD· 1 shared Lena CollienneiD· 1 shared Mareike FischeriD· 1 shared

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2019-2021 · peak 1/yr

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7 top collaborators · 9 mutual co-author links

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1 shared paperBioinformatics

Alex GavryushkinORCID

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2 papers

Recent·Most cited

BioinformaticsGenome Biology and EvolutionPeer-reviewedSep 1, 2021

Phylogenetic context using phylogenetic outlines

Caner Bağcı, David Bryant, Banu Cetinkaya, Daniel H. Huson

The paper introduces an interactive tool using Mash sketches and SplitsTree5 to determine the phylogenetic context of draft genomes by displaying phylogenetic outlines.

11 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintDec 19, 2019

Geometry of Ranked Nearest Neighbour Interchange Space of Phylogenetic Trees

Lena Collienne, Kieran Elmes, Mareike Fischer…·Alex Gavryushkin

This paper analyzes the geometry of the ranked nearest neighbour interchange graph for phylogenetic trees, finding exact radius and diameter values and comparing it to the classical NNI graph.

1 citation

statistical modelbenchmarking

𝕏 PostBluesky