Author

Sally A. Mackenzie

Pennsylvania State UniversityORCID 0000-0003-2077-5607Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:DNA methylation· 3 Research Focus:differential expression· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Robersy SáncheziD· 3 shared Hardik KundariyaiD· 2 shared Akshay U. NairiD· 1 shared Alenka HafneriD· 1 shared Jose R Barreras· 1 shared Xiaodong YangiD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 11 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersPlant Biology

Robersy SánchezORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Plant BiologyCurrent ZoologyPeer-reviewedJan 1, 2026

Intragenic methylation repatterning is associated with alternative splicing and unique epigenetic phenotypes

Alenka Hafner, Hardik Kundariya, Robersy Sánchez…·Sally A. Mackenzie

The paper shows that intragenic methylation changes in Arabidopsis correlate with alternative splicing and phenotypic changes under stress.

DOI 10.1093/eep/dvag026

ArabidopsisDNA methylation

𝕏 PostBluesky

GenomicsInternational Journal of Molecular SciencesPeer-reviewedOct 27, 2019

Enhancing resolution of natural methylome reprogramming behavior in plants

Robersy Sánchez, Xiaodong Yang, Jose R Barreras…·Sally A. Mackenzie

The paper introduces Methyl-IT, a method for analyzing methylomes using information thermodynamics and signal detection, improving resolution of methylation changes in plants.

20 citations

plant (other)DNA methylation

𝕏 PostBluesky

BioinformaticsbioRxivPreprintApr 3, 2018

Example of Methylome Analysis with MethylIT using Cancer Datasets

Robersy Sánchez, Sally A. Mackenzie

The paper demonstrates the application of MethylIT to analyze breast cancer methylomes, revealing network-associated methylation responses with improved resolution.

DOI 10.1101/261982

humanDNA methylation

𝕏 PostBluesky