Author

Ravishankar K. Iyer

University of Illinois Urbana-ChampaignORCID 0000-0003-2245-3038Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Organism:human· 1 Approach:statistical model· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Daniel R. O’BrieniD· 1 shared Derek E. WildmaniD· 1 shared Eric D. WiebeniD· 1 shared Eric W. KleeiD· 1 shared Jacob R. Heldenbrand· 1 shared Jean‐Pierre KocheriD· 1 shared Lewis Rowland RobertsiD· 1 shared Liudmila Sergeevna MainzeriD· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Daniel R. O’BrienORCID

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2 papers

Recent·Most cited

BioinformaticsPLoS ONEPeer-reviewedSep 22, 2021

Exogene: A performant workflow for detecting viral integrations from paired-end next-generation sequencing data

Zachary D. Stephens, Daniel R. O’Brien, Mrunal K. Dehankar…·Jean‐Pierre Kocher

Exogene detects viral integrations from paired-end sequencing data with high concordance to long-read validation, identifying new integrations in HCC samples.

6 citations

humanwhole-genome sequencing

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BioinformaticsbioRxivPreprintJun 18, 2018

Performance benchmarking of GATK3.8 and GATK4

Jacob R. Heldenbrand, Saurabh Baheti, Matthew A. Bockol…·Liudmila Sergeevna Mainzer

This study benchmarks GATK3.8 and GATK4 to evaluate performance improvements and cost trade-offs in genomic variant calling.

13 citations

whole-genome sequencingbenchmark study

𝕏 PostBluesky