Author

Svetlana A. Shabalina

National Institutes of HealthORCID 0000-0003-2272-7473Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:bacteria (other)· 2 Research Focus:database / resource· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Anna B. SeminaraiD· 1 shared Caroline EsnaultiD· 1 shared Daniel D. TetreaultiD· 1 shared Eugene V. KooniniD· 1 shared Harutyun SahakyaniD· 1 shared Igor A. FesenkoiD· 1 shared Max Freedman· 1 shared Maxime Zamba‐Campero· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperMicrobiology

Anna B. SeminaraORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 27, 2026

Global RNA-RNA interactome mapping in B. burgdorferi reveals base-pairing sRNAs that rewire gene expression across growth

Daniel D. Tetreault, Anna B. Seminara, Ryan Fishman…·Philip P. Adams

The paper identifies sRNA candidates in B. burgdorferi and maps their regulatory interactions across growth phases, revealing a dynamic RNA-RNA interactome.

DOI 10.64898/2026.10.26.761956

bacteria (other)bulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintFeb 17, 2024

The Cryptic Bacterial Microproteome

Igor A. Fesenko, Harutyun Sahakyan, Svetlana A. Shabalina, Eugene V. Koonin

This study identifies thousands of bacterial microproteins from Enterobacteriaceae genomes, revealing lineage-specific families and potential regulatory roles under stress.

3 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky