Author

Patrick Abbot

Vanderbilt UniversityORCID 0000-0003-2481-3105Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Antonis RokasiD· 1 shared Haley R. Eidem· 1 shared Jacob Lucas SteenwykiD· 1 shared Jennifer H. WisecaveriD· 1 shared John A. CapraiD· 1 shared Stephanie S.L. BirnbaumiD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 10 mutual co-author links

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1 shared paperGenomics

Antonis RokasORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintFeb 5, 2019

Trans-generational transcriptomic response to natural variation in host plant toxicity and insecticides in a specialist insect.

Stephanie S.L. Birnbaum, Patrick Abbot

The paper examines trans-generational transcriptomic responses of aphids to host plant toxicity and insecticides, finding increased transcriptional plasticity and changes in metabolic and regulatory genes.

3 citations

bulk RNA-seqexperimental assay

𝕏 PostBluesky

GenomicsBMC Medical GenomicsPeer-reviewedNov 19, 2018

integRATE: a desirability-based data integration framework for the prioritization of candidate genes across heterogeneous omics and its application to preterm birth

Haley R. Eidem, Jacob Lucas Steenwyk, Jennifer H. Wisecaver…·Antonis Rokas

integRATE prioritizes candidate genes across heterogeneous omics data by using desirability functions, identifying known and novel genes in preterm birth.

8 citations

humanbulk RNA-seq

𝕏 PostBluesky