Author

Yang Cheng Fann

National Institutes of HealthORCID 0000-0003-2636-2002Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 3 Assay:bulk RNA-seq· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Barbara S. MalloniD· 2 shared Kevin G. CheniD· 2 shared Kory R. JohnsoniD· 2 shared Alison Garcia· 1 shared Ching-Heng LiniD· 1 shared Evan S. McCreedy· 1 shared Leonie Misquitta· 1 shared Matthew McAuliffeiD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersBioinformatics

Barbara S. MallonORCID

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3 papers

Recent·Most cited

Multivariate Meta-Analysis of Differential Principal Components underlying Human Primed and Naive-like Pluripotent States

Kory R. Johnson, Barbara S. Mallon, Yang Cheng Fann, Kevin G. Chen

This paper performs a multivariate meta-analysis of human pluripotent stem cell datasets to assess the existence of a naive pluripotent state, finding inconsistencies and no clear transcriptomic markers for a bona fide human naive state.

bioRxiv · Oct 20, 2020 · PreprintBioinformatics

Interlaboratory Data Variability Contributes to the Differential Principal Components of Human Primed and Naïve-like Pluripotent States in Multivariate Meta-Analysis

Kory R. Johnson, Barbara S. Mallon, Yang Cheng Fann, Kevin G. Chen

The paper performs a multivariate meta-analysis of human pluripotent stem cell datasets to assess interlaboratory variability in defining naive-like pluripotent states.

bioRxiv · Oct 29, 2019 · PreprintBioinformatics

Standardized Informatics Computing Platform for Advancing Biomedical Discovery Through Data Sharing

Vivek Navale, Michelle Ji, Evan S. McCreedy, Tsega Gebremichael, Alison Garcia, Leonie Misquitta, Ching-Heng Lin, Yang Cheng Fann, Matthew McAuliffe

The paper introduces BRICS, a standardized informatics computing platform for managing biomedical research data, enabling data sharing and analysis across multiple domains.

bioRxiv · Feb 6, 2018 · PreprintBioinformatics