Author

Delphine Ropers

Centre National de la Recherche ScientifiqueORCID 0000-0003-2659-3003Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Research Focus:metabolism & bioenergetics· 1 Assay:metagenomics· 1 Organism:multiple species· 1 Assay:proteomics· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Hidde de JongiD· 3 shared Acely Garza-Garcı́aiD· 1 shared Arnaud BelcouriD· 1 shared Caroline MicheliD· 1 shared Ignacia Cancino AguirreiD· 1 shared Jean‐Luc GouzéiD· 1 shared Loris Megy· 1 shared Luiz Pedro S. de CarvalhoiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersMicrobiology

Hidde de JongORCID

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Author profile →

3 papers

Recent·Most cited

Multi-Species, Genome-Wide Metabolic Network Reconstructions Reveal the Basis for Metabolic Versatility in Mycobacteria

Ignacia Cancino Aguirre, Manisha Priya, Acely Garza-Garcı́a, Luiz Pedro S. de Carvalho, Hidde de Jong, Delphine Ropers

The paper develops genome-scale metabolic models for five Mycobacterium species to test if metabolic versatility stems from nutrient uptake capabilities, finding that transporters and substrate availability are key.

bioRxiv · Sep 4, 2026 · PreprintMicrobiology

Predicting coarse-grained representations of biogeochemical cycles from metabarcoding data

Arnaud Belcour, Loris Megy, Sylvain Stéphant, Caroline Michel, Sétareh Rad, Petra Bombach, Nicole Dopffel, Hidde de Jong, Delphine Ropers

The paper develops a pipeline called Tabigecy to predict metabolic functions from metabarcoding data and integrate them into biogeochemical cycle representations.

Bioinformatics · Apr 28, 2025Peer-reviewedBioinformatics

Resource allocation accounts for the large variabilityof rate-yield phenotypes across bacterial strains

Valentina Baldazzi, Delphine Ropers, Jean‐Luc Gouzé, Tomáš Gedeon, Hidde de Jong

The paper develops a model showing resource allocation strategies explain growth rate and yield variability in E. coli strains, supported by experimental data.

eLife · May 31, 2023Peer-reviewedSystems Biology