Author

Kenan Jijakli

University of Illinois Urbana-ChampaignORCID 0000-0003-2680-1239Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Synthetic Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:machine learning (classical)· 1 Assay:protein sequence· 1 Research Focus:sequence-to-function modeling· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alex Toftgaard NielseniD· 1 shared Bjarke Erichsen· 1 shared Jinbei LiiD· 1 shared Lei YangiD· 1 shared Paul A. JenseniD· 1 shared Shaoze YuaniD· 1 shared Simon R KrarupiD· 1 shared Søren Michael KarstiD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 21 mutual co-author links

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1 shared paperSynthetic Biology

Alex Toftgaard NielsenORCID

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2 papers

Recent·Most cited

Synthetic BiologybioRxivPreprintOct 24, 2025

MillionFull enables massive, full-length enzyme sequence-fitness data collection at low cost for machine learning-guided enzyme engineering

Jinbei Li, Bjarke Erichsen, Simon R Krarup…·Alex Toftgaard Nielsen

MillionFull collects large-scale sequence-fitness data for enzymes at low cost, enabling machine learning for enzyme engineering.

DOI 10.1101/2025.10.24.684421

protein sequencemachine learning (classical)

𝕏 PostBluesky

Systems BiologymSystemsPeer-reviewedOct 29, 2019

Metabolic modeling of Streptococcus mutans reveals complex nutrient requirements of an oral pathogen

Kenan Jijakli, Paul A. Jensen

The paper constructs a genome-scale metabolic model of Streptococcus mutans and validates it against experimental data, showing high accuracy in predicting nutrient requirements and gene essentiality.

42 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky