Author

Jörg Linde

Friedrich-Loeffler-InstitutORCID 0000-0003-2727-9518Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:long-read sequencing· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Akash SrivastavaiD· 1 shared Andreas TjärnbergiD· 1 shared Bastian SeelbinderiD· 1 shared Bettina Stieber· 1 shared Christian BrandtiD· 1 shared Christian Höner zu SiederdisseniD· 1 shared Colm E. NestoriD· 1 shared Damian WollnyiD· 1 shared

Activity by Year

2017-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperBioinformatics

Akash SrivastavaORCID

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3 papers

Recent·Most cited

BioinformaticsNucleic Acids ResearchPeer-reviewedJan 22, 2026

Unlocking the Full Potential of Nanopore Sequencing: Tips, Tricks, and Advanced Data Analysis Techniques

Daria Meyer, Winfried Göettsch, Jannes Spangenberg…·Manja Marz

This paper provides an overview and analysis of nanopore sequencing, offering guidelines to address challenges and maximize information gain from the technology.

8 citationstop 4%

long-read sequencingstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintSep 16, 2019

GEO2RNAseq: An easy-to-use R pipeline for complete pre-processing of RNA-seq data

Bastian Seelbinder, Thomas Wolf, Steffen Priebe…·Jörg Linde

GEO2RNAseq is an R pipeline that automates RNA-seq pre-processing and analysis, supporting single, dual, and triple RNA-seq data.

21 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky

Systems BiologyPLoS Computational BiologyPeer-reviewedJun 22, 2017

LASSIM - a network inference toolbox for genome-wide mechanistic modeling

Rasmus Magnusson, Guido Pio Mariotti, Mattias Köpsén…·Mika Gustafsson

LASSIM infers genome-wide gene regulatory networks using mechanistic ODE models, demonstrating its effectiveness in modeling Th2 differentiation with integrated data and siRNA experiments.

10 citations

humanbulk RNA-seq

𝕏 PostBluesky