Author

Michael Mascagni

Florida State UniversityORCID 0000-0003-3058-4580Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Research Focus:genome assembly· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Lizhen ShiiD· 2 shared Zhong WangiD· 2 shared Elizabeth TsengiD· 1 shared Li DengiD· 1 shared Marc W. Van GoethemiD· 1 shared Volkan Sevi̇miD· 1 shared Xiandong MengiD· 1 shared Yakang Lu· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

Lizhen ShiORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJan 25, 2021

Hybrid Clustering of Long and Short-read for Improved Metagenome Assembly

Yakang Lu, Lizhen Shi, Marc W. Van Goethem…·Zhong Wang

This paper introduces a hybrid clustering algorithm for metagenome assembly that improves accuracy and scalability by combining long and short-read clustering.

1 citation

metagenomicsstatistical model

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedAug 22, 2018

SpaRC: Scalable Sequence Clustering using Apache Spark

Lizhen Shi, Xiandong Meng, Elizabeth Tseng…·Zhong Wang

SpaRC clusters large-scale sequence data using Apache Spark, achieving scalability and performance across transcriptomics and metagenomics datasets.

26 citations

metagenomicswhole-genome sequencing

𝕏 PostBluesky