Author

Yakang Lu

Shanghai University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:genome assembly· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1

Frequent Co-Authors

Lizhen ShiiD· 2 shared Zhong WangiD· 2 shared Kexue LiiD· 1 shared Li DengiD· 1 shared Li DengiD· 1 shared Lili Wang· 1 shared Marc W. Van GoethemiD· 1 shared Michael MascagniiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 24 mutual co-author links

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2 shared papersBioinformatics

Lizhen ShiORCID

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2 papers

Recent·Most cited

Hybrid Clustering of Long and Short-read for Improved Metagenome Assembly

Yakang Lu, Lizhen Shi, Marc W. Van Goethem, Volkan Sevi̇m, Michael Mascagni, Li Deng, Zhong Wang

This paper introduces a hybrid clustering algorithm for metagenome assembly that improves accuracy and scalability by combining long and short-read clustering.

bioRxiv · Jan 25, 2021 · PreprintBioinformatics

Deconvolute individual genomes from metagenome sequences through short read clustering

Kexue Li, Yakang Lu, Li Deng, Lili Wang, Lizhen Shi, Zhong Wang

The paper improves short read clustering for metagenome assembly by reducing under-clustering through sample-based statistics, showing effectiveness on mouse gut microbiome data.

PeerJ · Apr 8, 2020Peer-reviewedBioinformatics