Author

Aziz Ebrahimi

Purdue University West LafayetteORCID 0000-0003-3122-0404Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Organism:plant (other)· 3 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:phylogenetics / evolution· 2 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Amanda Mueller· 1 shared Anna O. ConradiD· 1 shared Anthony HeiD· 1 shared Carolina JaraiD· 1 shared Carolyn C. PikeiD· 1 shared Charles E. FloweriD· 1 shared Cornelia C. PinchotiD· 1 shared Cristopher R. Guzman-TorresiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Amanda Mueller

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintAug 12, 2026

Chromosome-scale reference genomes for two walnuts: Juglans ailantifolia and Juglans cinerea implicate gene presence and absence in fungal defense divergence

Cynthia Webster, Karl C. Fetter, Anthony He…·Jill Wegrzyn

The paper presents chromosome-scale genomes for two walnut species and identifies gene presence/absence differences linked to fungal defense mechanisms between tolerant and susceptible populations.

DOI 10.64898/2026.07.29.740795

plant (other)whole-genome sequencing

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GenomicsbioRxivPreprintNov 25, 2025

Phylogenomic and comparative genome analysis of the Juglandaceae family reveals black walnut (Juglans nigra) as an ancient lineage of the Rhysocaryon section.

Aziz Ebrahimi, Samarth Mathur, Mohammad Mehdi Arab…·Douglass Frederick Jacobs

The paper uses genomic data to analyze the Juglans genus, finding black walnut as an ancient lineage with implications for conservation and climate adaptation.

2 citations

plant (other)whole-genome sequencing

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GenomicsTree Genetics & GenomesPeer-reviewedJan 9, 2021

The complete chloroplast genome sequence of American elm (Ulmus americana) and comparative genomics of related species

Aziz Ebrahimi, Jennifer D. Antonides, Cornelia C. Pinchot…·Keith Woeste

The paper sequences and analyzes the chloroplast genome of American elm, identifying genetic differences with related species and providing resources for genetic diversity studies.

6 citations

plant (other)DNA methylation

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