Author

Ana Claudia Sima

SIB Swiss Institute of BioinformaticsORCID 0000-0003-3213-4495Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Organism:mouse· 1 Assay:protein sequence· 1

Frequent Co-Authors

Christophe DessimoziD· 2 shared Tarcisio Mendes de FariasiD· 2 shared Erich ZbindeniD· 1 shared Frederic BastianiD· 1 shared Heinz Stockinger CiD· 1 shared Hirokazu ChibaiD· 1 shared Hiroshi MasuyaiD· 1 shared Kurt StockingeriD· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBioinformatics

Christophe DessimozORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintAug 30, 2023

Exploring Disease Model Mouse Using Knowledge Graphs: Combining Gene Expression, Orthology, and Disease Datasets

Tatsuya Kushida, Tarcisio Mendes de Farias, Ana Claudia Sima…·Hiroshi Masuya

The paper integrates multiple biological datasets to explore disease-related genes and bioresources using SPARQL queries, identifying relevant genes and anatomical parts for Alzheimer's and melanoma research.

2 citations

mousebulk RNA-seq

𝕏 PostBluesky

BioinformaticsDatabasePeer-reviewedJan 1, 2019

Enabling Semantic Queries Across Federated Bioinformatics Databases

Ana Claudia Sima, Tarcisio Mendes de Farias, Erich Zbinden…·Christophe Dessimoz

The paper introduces a semantic model and federated approach to integrate heterogeneous biological databases, enabling joint queries across gene expression, orthology, and protein data sources.

37 citations

protein sequencestatistical model

𝕏 PostBluesky