Author

James C. Schaff

Applied BioMath (United States)ORCID 0000-0003-3286-7736Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Ion I. MoraruiD· 2 shared Michael L. BlinoviD· 2 shared Alexander A. PatrieiD· 1 shared Bilal ShaikhiD· 1 shared Dan Dragos Vasilescu· 1 shared David Phillip NickersoniD· 1 shared Elebeoba E. May· 1 shared Eran AgmoniD· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersSystems Biology

Ion I. MoraruORCID

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2 papers

Recent·Most cited

Systems BiologyPLoS Computational BiologyPeer-reviewedDec 4, 2025

Verification and reproducible curation of the BioModels repository

Lucian P. Smith, Rahuman S. Malik‐Sheriff, Tung V. N. Nguyen…·Herbert M. Sauro

The paper updates and corrects SED-ML files for 1055 models in BioModels to improve reproducibility and verification across simulation engines.

3 citations

statistical modelbenchmarking

𝕏 PostBluesky

Systems BiologybioRxivPreprintDec 23, 2018

Molecular Process Diagram: a precise, scalable and compact visualization of rule-based models

Dan Dragos Vasilescu, James B. Greene, James C. Schaff…·Michael L. Blinov

The paper introduces Molecular Process Diagrams to visually represent rule-based models with precision and clarity, extending SBGN standards for better pathway understanding.

1 citation

statistical modelsoftware / tool

𝕏 PostBluesky