Author

Zimei Zhang

University of Science and Technology of ChinaORCID 0000-0003-3428-9482Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:drug response / drug discovery· 2 Assay:bulk RNA-seq· 1 Approach:diffusion model· 1 Assay:protein structure· 1 Approach:statistical model· 1

Frequent Co-Authors

Mingyue ZhengiD· 2 shared Runze ZhangiD· 2 shared Shengkun Ni· 2 shared Xiangtai KongiD· 2 shared Yitian WangiD· 2 shared Duanhua CaoiD· 1 shared Jiacheng XiongiD· 1 shared Jiangshan Shi· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Mingyue ZhengORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintApr 8, 2024

Identify compound-protein interaction with knowledge graph embedding of perturbation transcriptomics

Shengkun Ni, Xiangtai Kong, Yingying Zhang…·Mingyue Zheng

PertKGE improves compound-protein interaction prediction using knowledge graph embedding of perturbation transcriptomics, outperforming baselines in cold-start settings and identifying novel therapeutic targets.

DOI 10.1101/2024.04.08.588632

bulk RNA-seqstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 31, 2024

PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking

Runze Zhang, Xinyu Jiang, Duanhua Cao…·Mingyue Zheng

PackDock predicts accurate protein-ligand complex conformations using a diffusion model for side-chain packing, validated through multiple docking experiments.

3 citations

protein structurediffusion model

𝕏 PostBluesky