Author

Jiangshan Shi

Chinese Academy of Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:drug response / drug discovery· 1 Approach:statistical model· 1

Frequent Co-Authors

Kun WangiD· 1 shared Mingyue ZhengiD· 1 shared Ning Qu· 1 shared Ruifeng Huo· 1 shared Ruirui YangiD· 1 shared Runze ZhangiD· 1 shared Shengkun Ni· 1 shared Sulin ZhangiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Kun WangORCID

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1 paper

Recent·Most cited

Identify compound-protein interaction with knowledge graph embedding of perturbation transcriptomics

Shengkun Ni, Xiangtai Kong, Yingying Zhang, Zhengyang Chen, Zhaokun Wang, Zunyun Fu, Ruifeng Huo, Xiaochu Tong, Ning Qu, Xiaolong Wu, Kun Wang, Wei Dong Zhang, Runze Zhang, Zimei Zhang, Jiangshan Shi, , Mingyue Zheng

PertKGE improves compound-protein interaction prediction using knowledge graph embedding of perturbation transcriptomics, outperforming baselines in cold-start settings and identifying novel therapeutic targets.

bioRxiv · Apr 8, 2024 · PreprintBioinformatics