Author

Ziyu Shi

The University of Texas Medical Branch at GalvestonORCID 0000-0003-3526-7111Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biochemistry· 1

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Research Focus:protein design· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1

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Gary SuniD· 1 shared Haiqing ZhaoiD· 1 shared Hugues Fausther‐Bovendo· 1 shared Surendra S. Negi· 1 shared Zhiyuan SongiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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1 shared paperBiochemistry

Gary SunORCID

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1 paper

Recent·Most cited

BiochemistrybioRxivPreprintSep 29, 2026

GraPPI: A Self-Supervised Graph Encoder for Transferable Protein--Protein Interaction Modeling

Zhiyuan Song, Ziyu Shi, Gary Sun…·Haiqing Zhao

GraPPI develops a self-supervised graph encoder for protein-protein interaction modeling, achieving high performance in binding interface prediction and affinity prediction.

DOI 10.64898/2026.09.28.755140

protein structuredeep learning

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