Author

Mohammad Reza Eftekhariyan Ghamsari

The University of MelbourneORCID 0000-0003-3531-3042Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:benchmark study· 2 Research Focus:benchmarking· 2 Organism:human· 2 Assay:scRNA-seq· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Matthew E. RitchieiD· 2 shared Yupei YouiD· 2 shared Ashleigh N. SolanoiD· 1 shared Bénédicte DuboisiD· 1 shared Camilla PasqualiiD· 1 shared Carolyn A. de GraafiD· 1 shared Changqing WangiD· 1 shared Hamid Alinejad‐RoknyiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersGenomics

Matthew E. RitchieORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 11, 2025

Benchmarking long-read RNA-sequencing technologies with LongBench: a cross-platform reference dataset profiling cancer cell lines with bulk and single-cell approaches

Yupei You, Ashleigh N. Solano, James Lancaster…·Matthew E. Ritchie

LongBench benchmarks long-read RNA-sequencing technologies using a cross-platform dataset of cancer cell lines, showing high gene-level concordance but reduced transcript-level consistency across platforms.

14 citations

humanbulk RNA-seq

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BioinformaticsbioRxivPreprintSep 8, 2025

Comparative Analysis of Single-Nucleus and Single-Cell RNA Sequencing in Human Bone Marrow Mononuclear Cells: Methodological Insights and Trade-offs

Mohammad Reza Eftekhariyan Ghamsari, Carolyn A. de Graaf, Rachel Thijssen…·Matthew E. Ritchie

This study compares single-nucleus and single-cell RNA sequencing in human bone marrow mononuclear cells, identifying method-specific biases and trade-offs.

DOI 10.1101/2025.09.08.675012

humanscRNA-seq

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