Author

Anaïs Painset

Public Health EnglandORCID 0000-0003-3569-6530Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 3 Assay:whole-genome sequencing· 3 Organism:bacteria (other)· 2 Research Focus:database / resource· 2 Approach:experimental assay· 2 Approach:biophysical modeling· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Caitlin CollinsiD· 2 shared Claire JenkinsiD· 2 shared Clare R. BarkeriD· 2 shared David R. GreigiD· 2 shared Marie Anne ChattawayiD· 2 shared Matthew T. BirdiD· 2 shared Paolo RibecaiD· 2 shared Satheesh NairiD· 2 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Caitlin CollinsORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 12, 2025

Large-scale genomic characterisation of phage-plasmids in clinical Enterobacteriaceae isolates

Satheesh Nair, Clare R. Barker, Matthew T. Bird…·Paolo Ribeca

This study characterizes phage-plasmids in clinical Enterobacteriaceae isolates, finding they are common and associated with antimicrobial resistance and disease severity.

DOI 10.1101/2025.09.12.675607

humanwhole-genome sequencing

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MicrobiologybioRxivPreprintFeb 2, 2024

Presence of phage-plasmids in multiple serovars of Salmonella enterica

Satheesh Nair, Clare R Barker, Matthew Bird…·Paolo Ribeca

This study identifies phage-plasmids in multiple Salmonella serovars, showing their prevalence and serovar-specific distribution, with implications for antimicrobial resistance transmission.

DOI 10.1101/2024.02.02.574330

bacteria (other)whole-genome sequencing

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BioinformaticsBioinformaticsPeer-reviewedApr 4, 2018

SnapperDB: A database solution for routine sequencing analysis of bacterial isolates

Timothy J. Dallman, Philip Ashton, Ulf Schafer…·Kathie Grant

SnapperDB provides tools for storing and analyzing bacterial variant data to enable scalable and reproducible SNP analysis of microbial populations.

216 citationstop 1%

bacteria (other)whole-genome sequencing

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