Author

Kathie Grant

Public Health England

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Claire JenkinsiD· 2 shared Philip AshtoniD· 2 shared Aleksey JironkiniD· 1 shared Anaïs PainsetiD· 1 shared Anthony P. UnderwoodiD· 1 shared Anthony Underwood· 1 shared Catherine Arnold· 1 shared Elizabeth de Pinna· 1 shared

Activity by Year

2015-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersBioinformatics

Claire JenkinsORCID

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2 papers

Recent·Most cited

SnapperDB: A database solution for routine sequencing analysis of bacterial isolates

Timothy J. Dallman, Philip Ashton, Ulf Schafer, Aleksey Jironkin, Anaïs Painset, Sharif Shaaban, Hassan B. Hartman, Richard E. Myers, Anthony P. Underwood, Claire Jenkins, Kathie Grant

SnapperDB provides tools for storing and analyzing bacterial variant data to enable scalable and reproducible SNP analysis of microbial populations.

Bioinformatics · Apr 4, 2018Peer-reviewedBioinformatics

Revolutionising Public Health Reference Microbiology using Whole Genome Sequencing: Salmonella as an exemplar

Philip Ashton, Satheesh Nair, Tansy Peters, Rediat Tewolde, Martin Day, Michel Doumith, Jonathan Green, Claire Jenkins, Anthony Underwood, Catherine Arnold, Elizabeth de Pinna, Tim Dallman, Kathie Grant

This paper reports the first routine use of whole genome sequencing (WGS) for public health microbiology, demonstrating its impact on Salmonella identification, surveillance, and outbreak investigation.

bioRxiv · Nov 29, 2015 · PreprintMicrobiology