Author

Kerstin Hahn

F. Hoffmann-La Roche AGORCID 0000-0003-3602-4234Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Organism:multiple species· 1

Frequent Co-Authors

Alberto ValdeolivasiD· 2 shared Sven RottenbergiD· 2 shared Ali NowrouziiD· 1 shared Bettina AmbergiD· 1 shared Björn JacobseniD· 1 shared David M. MarkusiciD· 1 shared Demeter TúrósiD· 1 shared Fabian Köchl· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersMolecular Biology

Alberto ValdeolivasORCID

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2 papers

Recent·Most cited

Molecular BiologyGene TherapyPeer-reviewedMar 11, 2026

Spatial Transcriptomics and Single-Nucleus RNA Sequencing Reveal rAAV2- and rAAV9-Specific Transduction Signatures in the Mouse Liver

Bettina Amberg, Fabian Köchl, Nadine Kumpesa…·Kerstin Hahn

This study uses spatial transcriptomics and single-nucleus RNA sequencing to analyze rAAV2 and rAAV9 vector effects in mouse livers, revealing sex-specific transcriptomic changes and novel transgene co-expression factors.

1 citation

mousespatial transcriptomics

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BioinformaticsCommunications BiologyPeer-reviewedNov 16, 2024

Chrysalis: decoding tissue compartments in spatial transcriptomics with archetypal analysis

Demeter Túrós, Jelica Vasiljević, Kerstin Hahn…·Alberto Valdeolivas

Chrysalis identifies tissue compartments in spatial transcriptomics using archetypal analysis and spatially variable gene detection without external references.

9 citations

multiple speciesspatial transcriptomics

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