Author

Jessica Koski

University of HelsinkiORCID 0000-0003-3619-652XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Genetic & Genomic Medicine· 1 Molecular Biology· 1 Synthetic Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1

Frequent Co-Authors

Esa PitkäneniD· 3 shared Outi KilpivaaraiD· 3 shared Aarno V. PalotieiD· 2 shared Caroline Akemi HeckmaniD· 2 shared Jarno K. HonkaneniD· 2 shared Jukka PartaneniD· 2 shared Julianna Juvila· 2 shared Mark J. DalyiD· 2 shared

Activity by Year

2020-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersMolecular Biology

Esa PitkänenORCID

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4 papers

Recent·Most cited

Molecular BiologybioRxivPreprintSep 30, 2025

Blood donor biobank pipeline to collect genome-based samples for research

Jarno K. Honkanen, Veera A. Timonen, Jessica Koski…·Jukka Partanen

The paper describes a pipeline for collecting high-quality blood samples from donors for multi-omics research, demonstrating their suitability for genetic and phenotypic studies.

1 citation

humanwhole-genome sequencing

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Genetic & Genomic MedicinemedRxivPreprintOct 23, 2024

Pathogenicity evaluation of coding germline variants identifies rare alleles enriched in hematological patients of a founder population

Jessica Koski, Laura Langohr, Tuulia Räisänen…·Outi Kilpivaara

The paper evaluates germline variants in hematological malignancies using a computational pipeline, identifying pathogenic alleles and enriched variants in CHEK2 and other genes.

1 citation

humanwhole-exome sequencing

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Cell BiologybioRxivPreprintMay 17, 2024

Image-based profiling of healthy donor immune cells with Blood Cell Painting reveals novel genotype-phenotype associations

Caroline Högel-Starck, Veera A. Timonen, Gantugs Atarsaikhan…·Esa Pitkänen

The paper develops Blood Cell Painting (BCP) to profile immune cell morphology in healthy donors, identifying genetic and clinical associations with immune cell features.

5 citations

humanimaging

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Synthetic BiologyCommunications BiologyPeer-reviewedSep 17, 2020

Robust Estimation of Bacterial Cell Count from Optical Density

Jacob Beal, Natalie G. Farny, Traci L. Haddock…·Dror Aizik

The paper evaluates three OD calibration protocols for bacterial cell count estimation and recommends serial dilution of silica microspheres for its precision and compatibility with flow cytometry.

290 citationstop 1%

E. coliexperimental assay

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