Author

Shixiu Wu

Hangzhou Cancer HospitalORCID 0000-0003-3731-7274Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Assay:scRNA-seq· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Christopher E. MasoniD· 2 shared Alain BorczukiD· 1 shared Alon ShaiberiD· 1 shared Amos J. ShemeshiD· 1 shared Andrea C. GranadosiD· 1 shared Andrew A. FarmeriD· 1 shared Angelika Iftner· 1 shared Ari M. MelnickiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Christopher E. MasonORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsPrecision Clinical MedicinePeer-reviewedApr 9, 2025

A benchmarking study of copy number variation inference methods using single-cell RNA-sequencing data

Xin Chen, Li Tai Fang, Zhong Chen…·Charles Wang

This study benchmarks five scCNV inference methods across multiple scRNA-seq platforms and mixed samples, finding variations in performance based on data characteristics and batch effects.

9 citations

humanscRNA-seq

𝕏 PostBluesky

Molecular BiologyNature CommunicationsPeer-reviewedMar 12, 2021

Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions

Daniel Butler, Christopher Mozsary, Cem Meydan…·Christopher E. Mason

This study uses rapid diagnostics and metatranscriptomics to analyze SARS-CoV-2 infection, revealing viral evolution, host responses, and drug interactions in NYC samples.

201 citationstop 1%

humanbulk RNA-seq

𝕏 PostBluesky