Author

Olivia Mendivil Ramos

Cold Spring Harbor LaboratoryORCID 0000-0003-3740-1943Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Olivia Mendivil Ramos1 paper

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Organism:plant (other)· 1

Frequent Co-Authors

Melissa KrameriD· 2 shared Michael C. SchatziD· 2 shared Sara GoodwiniD· 2 shared William Richard McCombieiD· 2 shared Adam C. SiepeliD· 1 shared Armin SchebeniD· 1 shared Barbara A. AmbroseiD· 1 shared Cecilia Zumajo‐CardonaiD· 1 shared

Activity by Year

2016-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersGenomics

Melissa KramerORCID

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Author profile →

3 papers

Recent·Most cited

GenomicsGenome Biology and EvolutionPeer-reviewedSep 1, 2023

Long-read sequencing reveals rapid evolution of immunity- and cancer-related genes in bats

Armin Scheben, Olivia Mendivil Ramos, Melissa Kramer…·William Richard McCombie

This study uses long-read sequencing to analyze immune and cancer-related gene evolution in bats, finding gene contractions, expansions, and positive selection linked to their unique traits.

60 citationstop 1%

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintAug 24, 2023

The genome of the Wollemi pine, a critically endangered living fossil unchanged since the Cretaceous, reveals extensive ancient transposon activity.

Dennis Wm. Stevenson, Srividya Ramakrishnan, Cristiane de Santis Alves…·Robert A. Martienssen

The paper presents the genome of the Wollemi pine, revealing ancient transposon activity and insights into its conservation and evolutionary history.

DOI 10.1101/2023.08.24.554647

plant (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintSep 22, 2016

SiLiCO: A Simulator of Long Read Sequencing in PacBio and Oxford Nanopore

Ethan Alexander García Baker, Sara Goodwin, W. Richard McCombie, Olivia Mendivil Ramos

SiLiCO simulates long read sequencing data from PacBio and Oxford Nanopore to assess sequencing failure mechanics and provide standardized reference datasets.

DOI 10.1101/076901

long-read sequencingsimulation

𝕏 PostBluesky