Elio G. W. M. Schijlen

The paper identifies NF signaling controlled genes in Medicago truncatula nodule apices and shows their dependence on NIN.

This study reconstructs microbial consortia responsible for disease suppression in plants by combining dilution-to-extinction experiments with genome-resolved synthetic ecology.

The paper presents a high-quality reference genome and genetic map of Allium porrum, revealing pericentromeric recombination patterns and genomic relationships within the Allium genus.

This paper presents three new Capsicum genomes, expands the pangenome framework, and identifies genetic diversity and gene loci relevant to capsaicinoid biosynthesis.

This study presents two high-quality rose genomes and constructs a Rosa pangenome to explore genetic diversity, evolution, and breeding potential in the genus Rosa.

This study uses pollen sequencing to analyze recombination patterns in tomato hybrids, identifying coldspots and their association with transposable elements and gene complexes, and proposes strategies to overcome recombination barriers.

The paper presents the first annotated genome of okra, revealing its allopolyploid nature, sub-genome structure, and gene distribution patterns, along with insights into phenol biosynthesis pathways.

The paper reports a chromosome-level genome assembly of Lactuca saligna and identifies resistance genes associated with non-host resistance to downy mildew.

This paper introduces two open-source tools for processing and aligning optical mapping data to improve genome assembly and data utilization.

The paper presents the linked-read genome of Bracon brevicornis and investigates the complementary sex determiner gene using comparative analysis.

The paper presents an improved genome assembly of the European pear using long-read sequencing and other techniques, resulting in a more accurate gene count.

A PacBio and Hi-C tomato genome rebuild shrinks gaps from 81.71Mb to 44Kb; the matching ITAG4.0 annotation adds 4,794 genes and updates most carried-over models.

The paper presents a high-resolution chromosome-assigned genome of the Komodo dragon, identifying adaptations in cardiovascular, muscular, and chemosensory systems through comparative genomics.

Pacasus corrects artificial palindromic errors in long reads after whole-genome amplification, improving mapping and assembly results.

The paper presents a high-quality reference genome for Rosa chinensis, elucidating genome structure and genetic basis of ornamental traits.