Author

Aparna Vasanthakumar

AbbVie (United States)ORCID 0000-0003-3857-8812Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 2 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:proteomics· 1

Frequent Co-Authors

Jeffrey F. WaringiD· 2 shared Ashvani K. SinghiD· 1 shared Bridget M. Riley-GillisiD· 1 shared Britney Milkovich· 1 shared Charles S. LuiD· 1 shared Eugene NyamugendaiD· 1 shared Fedik RahimoviD· 1 shared Hara LevyiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersNeuroscience

Jeffrey F. WaringORCID

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3 papers

Recent·Most cited

NeuroscienceFrontiers in Aging NeurosciencePeer-reviewedOct 26, 2026

New Insights on Bridging Integrator 1 Protein Isoforms as a Risk Increasing Gene in Alzheimer's Disease

Min Hu, Sahar Esmaeeli, Lindsay R. Stolzenburg…·Aparna Vasanthakumar

The paper identifies BIN1 isoform expression patterns and genetic variants associated with Alzheimer's disease risk using GWAS and hiPSC differentiation data.

DOI 10.3389/fnagi.2026.1937726

humanbulk RNA-seq

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NeurosciencebioRxivPreprintApr 11, 2025

Validation and pre-analytical considerations for processing cerebrospinal fluid samples on a high-throughput proximity extension assay platform

Marieta Hyde, Michael L. Cunningham, Xiyun Chai…·Aparna Vasanthakumar

This study validates a proximity extension assay on a high-throughput platform using CSF samples and evaluates the impact of freeze-thaw cycles on protein signal stability.

DOI 10.1101/2025.04.11.648439

humanproteomics

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Genetic & Genomic MedicinemedRxivPreprintMar 10, 2023

Diversity of CFTR variants across ancestries characterized using 454,727 UK biobank whole exome sequences

Justin E. Ideozu, Mengzhen Liu, Bridget M. Riley-Gillis…·Aparna Vasanthakumar

The paper characterizes CFTR variant diversity across six ancestries using UK Biobank whole exome sequences, identifying ancestry-specific variants and associations with CF-related phenotypes.

1 citation

humanwhole-exome sequencing

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