Author

Brewster F. Kingham

Delaware Biotechnology InstituteORCID 0000-0003-3862-7442Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1

Frequent Co-Authors

Andreas TeskeiD· 1 shared Brandon D. Evans Hutzenbiler· 1 shared Charles T. RobbinsiD· 1 shared David BeaudoiniD· 1 shared Diana P. BojanovaiD· 1 shared Elizabeth TsengiD· 1 shared Erin L. Bernberg· 1 shared Gustavo A. RamíreziD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperMicrobiology

Andreas TeskeORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintApr 15, 2024

The DNA event horizon in the Guaymas Basin subsurface biosphere: technical advances and re-defined limits in bulk extractions of nucleic acids from deep marine sediments

Gustavo A. Ramírez, Paraskevi Mara, David Beaudoin…·Andreas Teske

The paper evaluates DNA and RNA extraction protocols from Guaymas Basin sediments, showing that temperature and hydrothermal influence significantly impact nucleic acid recovery and microbial community analysis.

1 citation

DNA methylationbulk RNA-seq

𝕏 PostBluesky

GenomicsG3 Genes Genomes GeneticsPeer-reviewedDec 21, 2021

Long-read isoform sequencing reveals tissue-specific isoform expression between active and hibernating brown bears (Ursus arctos)

Elizabeth Tseng, Jason G. Underwood, Brandon D. Evans Hutzenbiler…·Joanna L. Kelley

The paper uses long-read RNA sequencing to analyze isoform expression in brown bears during active and hibernation seasons, finding differential isoform usage in tissues even when genes are not differentially expressed.

18 citations

long-read sequencingstatistical model

𝕏 PostBluesky