Author

Alje Pieter van Dam

Amsterdam UMC Location University of AmsterdamORCID 0000-0003-3967-550XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 2 Research Focus:clustering· 1 Research Focus:host-pathogen & immune response· 1 Assay:long-read sequencing· 1 Approach:mechanistic / dynamical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Henry J.C. de VriesiD· 2 shared Alewijn Ott· 1 shared Andreas van ArkeliD· 1 shared Angela de HaaniD· 1 shared Anne L. M. Vlek· 1 shared Annet Troelstra· 1 shared Anouk E. MulleriD· 1 shared Anton G M Buiting· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersMicrobiology

Henry J.C. de VriesORCID

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintDec 8, 2025

Environmental exposure to antibiotics drives and sustains antibiotic resistance in Neisseria gonorrhoeae: A modelling study

Ernst Schäfer, Constance Schultsz, Henry J.C. de Vries…·Rik Oldenkamp

This study models how low-level environmental ciprofloxacin exposure maintains antibiotic resistance in Neisseria gonorrhoeae despite treatment discontinuation.

DOI 10.64898/2025.12.08.692580

humanmechanistic / dynamical model

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Genetic & Genomic MedicineGenome MedicinePeer-reviewedNov 25, 2024

Genomic surveillance of multidrug-resistant organisms based on long-read sequencing

Fabian Landman, Casper Jamin, Angela de Haan…·Radjin Steingrover

This study demonstrates that long-read sequencing is as accurate and more cost-effective than short-read sequencing for molecular characterization of multidrug-resistant organisms.

52 citationstop 2%

humanlong-read sequencing

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GenomicsJournal of Antimicrobial ChemotherapyPeer-reviewedMar 2, 2021

Emergence of a cephalosporin reduced susceptible Neisseria gonorrhoeae clone between 2014-2019 in Amsterdam, the Netherlands, revealed by a genomic population analysis

Jolinda de Korne-Elenbaas, Sylvia Maria Bruisten, Henry J.C. de Vries, Alje Pieter van Dam

30 citations

humanwhole-genome sequencing

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