Author

Antonio Ahn

Peter MacCallum Cancer CentreORCID 0000-0003-4053-5467Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:benchmark study· 1 Assay:CUT&Tag· 1 Organism:human· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Alicia OshlackiD· 2 shared Shom GoeliD· 2 shared April C. S. WattiD· 1 shared Brendan RussiD· 1 shared Calandra V GrimaiD· 1 shared Catherine BlythiD· 1 shared David YoannidisiD· 1 shared Deborah L. WhiteiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBioinformatics

Alicia OshlackORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintAug 29, 2026

Closing the fusion-detection gap in single-cell RNA-seq with a scalable, probe-based workflow

Jovana Maksimovic, Victoria Streeton-Cook, Calandra V Grima…·Teresa Sadras

The paper introduces a probe-based workflow to detect oncogenic gene fusions in single-cell RNA-seq, validated in cancer cell lines and pediatric B-ALL cohorts.

DOI 10.64898/2026.08.26.747171

humanscRNA-seq

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BioinformaticsbioRxivPreprintMay 25, 2026

Benchmarking normalisation methods for differential binding analysis in CUT&RUN

Krutika Ambani, Antonio Ahn, April C. S. Watt…·Alicia Oshlack

This study benchmarks normalization methods for differential binding analysis in CUT&RUN, finding data-driven normalization to be most robust and highlighting variable performance of spike-in normalization.

DOI 10.64898/2026.05.24.727463

CUT&Tagbenchmark study

𝕏 PostBluesky