Author

Rehan Zafar Paracha

National University of Sciences and TechnologyORCID 0000-0003-4227-1354Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1

Frequent Co-Authors

Afreenish AmiriD· 1 shared Maria ShabbiriD· 1 shared Mehak RafiqiD· 1 shared Razmia Sabahat ButtiD· 1 shared Syeda Mashaal Shah· 1 shared Uzma HabibiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 7 mutual co-author links

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1 shared paperBioinformatics

Afreenish AmirORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 27, 2026

Functional Characterization of Transcriptome-Wide Isoform Switching in Hürthle Cell Carcinoma (HCC)

Razmia Sabahat Butt, Afreenish Amir, Rehan Zafar Paracha

This study identifies 371 isoform switches in Hürthle cell carcinoma, revealing functional consequences like loss of protein domains and altered sub-cellular localization, with specific isoforms unique to tumors.

DOI 10.64898/2026.07.23.740299

humanbulk RNA-seq

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BioinformaticsbioRxivPreprintJun 5, 2023

Computational characterization of the interactions between novel Boronic Acid derivatives with urokinase-type plasminogen activator (uPA) and their binding energy

Syeda Mashaal Shah, Mehak Rafiq, Uzma Habib…·Maria Shabbir

The paper identifies C14H21BN2O2S as the best inhibitor of urokinase-type plasminogen activator (uPA) through computational docking, DFT analysis, and pharmacophore modeling.

DOI 10.1101/2023.06.05.543664

statistical modeldrug response / drug discovery

𝕏 PostBluesky