Author

John Tyson McDonald

Georgetown UniversityORCID 0000-0003-4300-6827Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2

Frequent Co-Authors

Afshin BeheshtiiD· 2 shared Amanda Saravia-ButleriD· 2 shared Deanne M. TayloriD· 2 shared Robert MelleriD· 2 shared Alicia VillacampaiD· 1 shared Ana Lúcia LeitãoiD· 1 shared Candice Ginn T. TahimiciD· 1 shared Chris WolvertoniD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Afshin BeheshtiORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMar 26, 2022

The interplay between lncRNAs, RNA-binding proteins and viral genome during SARS-CoV-2 infection reveals strong connections with regulatory events involved in RNA metabolism and immune response.

Francisco J. Enguita, Ana Lúcia Leitão, John Tyson McDonald…·Afshin Beheshti

The paper identifies a lncRNA signature associated with SARS-CoV-2 infection through transcriptomic analysis and functional correlation studies.

2 citations

humanbulk RNA-seq

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BioinformaticsiSciencePeer-reviewedMar 26, 2021

NASA GeneLab RNA-Seq Consensus Pipeline: Standardized Processing of Short-Read RNA-Seq Data

Eliah G. Overbey, Amanda Saravia-Butler, Zhe Zhang…·Jonathan M. Galazka

The paper describes a standardized RNA-Seq pipeline for spaceflight data, enabling reproducible analysis of gene expression changes in astronauts and organisms exposed to spaceflight.

53 citations

humanbulk RNA-seq

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