Gregory A. Babbitt

The paper introduces a calculus of attention (CES) to measure musical quality and attention signaling in human and animal vocalizations, showing high stability in professional performances.

The paper identifies a common mechanism across diverse viruses that use methionine residues to inhibit host defense by blocking the Rae1-Nup98 complex, supported by AI-assisted molecular dynamics.

The paper sonifies molecular dynamics to analyze musicality in amyloid interactions, finding they are more speech-like and musical than other protein interactions.

ATOMDANCE compares and denoises protein motion dynamics between functional or evolutionary states using kernel-based methods to identify key sites and functional shifts.

The paper uses machine learning and molecular dynamics to analyze how drug-resistant mutations in HIV-1 protease affect flap region dynamics and function.

The paper uses molecular dynamics simulations to assess cross-species infectivity of SARS-CoV-2 variants between humans and bats, finding that some variants retain significant binding affinity to bat ACE2.

The paper identifies protein sites contributing to vaccine escape by comparing molecular dynamics simulations of viral antigens with and without antibodies.