Author

John M. Berrisford

European Bioinformatics InstituteORCID 0000-0003-4442-5871Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 3 Assay:protein structure· 3 Approach:statistical model· 2

Frequent Co-Authors

Mihály VáradiiD· 3 shared Sameer S VelankariD· 3 shared Preeti ChoudharyiD· 2 shared Stephen AnyangoiD· 2 shared Ahsan TanweeriD· 1 shared Ardan PatwardhaniD· 1 shared David R. ArmstrongiD· 1 shared Déborah HarrusiD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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3 shared papersBioinformatics

Mihály VáradiORCID

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3 papers

Recent·Most cited

BioinformaticsDatabasePeer-reviewedJan 1, 2024

PDB NextGen Archive: Centralising Access to Integrated Annotations and Enriched Structural Information by the Worldwide Protein Data Bank

Preeti Choudhary, Zukang Feng, John M. Berrisford…·Stephen Kevin Burley

The PDB NextGen Archive centralizes and streamlines access to integrated structural annotations and enriched data from wwPDB partners and external sources.

17 citations

protein structuredatabase / resource

𝕏 PostBluesky

BioinformaticsScientific DataPeer-reviewedDec 1, 2023

Annotating Macromolecular Complexes in the Protein Data Bank: Improving the FAIRness of Structure Data

Sri Devan Appasamy, John M. Berrisford, Romana Gáborová…·Sameer S Velankar

The paper standardizes naming and annotations for macromolecular complexes in the PDB using external resources, improving FAIRness and enabling better research and education.

9 citations

protein structurestatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintAug 10, 2022

Unified access to up-to-date residue-level annotations from UniProt and other biological databases for PDB data via PDBx/mmCIF files

Preeti Choudhary, Stephen Anyango, John M. Berrisford…·Sameer S Velankar

The paper integrates up-to-date residue-level annotations from multiple databases into PDBx/mmCIF files to improve data interoperability and standardization.

2 citations

protein structurestatistical model

𝕏 PostBluesky