Author

Dallas R. Auer

Johns Hopkins UniversityORCID 0000-0003-4466-4135Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Research Focus:differential expression· 3 Organism:mouse· 3 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Assay:electronic health records· 1

Frequent Co-Authors

Aravinda ChakravartiiD· 4 shared Holly Ross· 3 shared Ashish KapooriD· 2 shared Priyanka NandakumariD· 2 shared Sumantra ChatterjeeiD· 2 shared Alexa Smith· 1 shared Christopher WardiD· 1 shared Courtney BerriosiD· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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4 shared papersGenetics

Aravinda ChakravartiORCID

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4 papers

Recent·Most cited

GeneticsG3 Genes Genomes GeneticsPeer-reviewedSep 14, 2023

Cardiac muscle-restricted partial loss of Nos1ap expression has limited impact on electro- and echo-cardiographic features

Alexa Smith, Dallas R. Auer, Morgan Johnson…·Ashish Kapoor

The paper investigates the impact of partial NOS1AP loss in cardiac muscle on electrocardiographic features, finding no effect on QT interval but a small reduction in QRS interval.

5 citations

mouseelectronic health records

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Developmental BiologyProceedings of the National Academy of SciencesPeer-reviewedAug 16, 2023

Ret loss-of-function decreases enteric neural crest progenitor proliferation and restricts developmental fate potential during enteric nervous system development

Elizabeth Vincent, Sumantra Chatterjee, Gabrielle Heather Cannon…·Loyal A. Goff

This study shows that Ret loss-of-function in mouse embryos reduces enteric neural crest progenitor proliferation and limits neuronal fate potential during ENS development.

32 citationstop 1%

mousescRNA-seq

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GeneticsJournal of Pediatric SurgeryPeer-reviewedDec 1, 2021

Multiple, independent, common variants overlapping known and putative gut enhancers at RET, SEMA3 and NRG1 underlie Hirschsprung disease risk in European ancestry subjects

Ashish Kapoor, Priyanka Nandakumar, Dallas R. Auer…·Aravinda Chakravarti

The paper identifies common noncoding variants at RET, SEMA3, and NRG1 loci associated with Hirschsprung disease risk in European ancestry individuals, showing cumulative effects on gene expression.

7 citations

humanGWAS summary statistics

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GeneticsbioRxivPreprintAug 8, 2019

The gastrointestinal development ‘parts list’: transcript profiling of embryonic gut development in wildtype and Ret-deficient mice

Sumantra Chatterjee, Priyanka Nandakumar, Dallas R. Auer…·Aravinda Chakravarti

The paper profiles RNA-seq data from wildtype and Ret-deficient mouse gut tissues during embryonic development to identify genetic programs involved in enteric nervous system formation and disease.

DOI 10.1101/730010

mousebulk RNA-seq

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