Author

Lucy R. Yates

Wellcome Sanger InstituteORCID 0000-0003-4519-7794Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Organism:human· 1 Assay:imaging· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Moritz GerstungiD· 2 shared Alexander W. JungiD· 1 shared Artem ShmatkoiD· 1 shared Carina StrelliD· 1 shared Harald S. VöhringeriD· 1 shared Jessica Svedlund· 1 shared Jun Sung ParkiD· 1 shared Kenny RobertsiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

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10 top collaborators · 25 mutual co-author links

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2 shared papersBioinformatics

Moritz GerstungORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 12, 2021

PoSTcode: Probabilistic image-based spatial transcriptomics decoder

Milana Gatarić, Jun Sung Park, Tong Li…·Moritz Gerstung

PoSTcode improves transcript decoding from spatial transcriptomic images by reducing mislabeling and doublet signals.

22 citations

spatial transcriptomicsstatistical model

𝕏 PostBluesky

BioinformaticsNature CancerPeer-reviewedJul 27, 2020

Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis

Yu Fu, Alexander W. Jung, Ramón Viñas…·Moritz Gerstung

This paper uses deep transfer learning on H&E images to correlate histopathological patterns with genomic and survival data across 28 cancer types, revealing associations between histopathology and molecular features.

660 citationstop 1%

𝕏 PostBluesky