Author

Carina Strell

Uppsala UniversityORCID 0000-0002-3783-7256Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 2 Bioinformatics· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Research Focus:cell-cell communication· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Mats F. NilssoniD· 2 shared Amanda LindbergiD· 1 shared Anastasia MagoulopoulouiD· 1 shared Andreas MetousisiD· 1 shared Annika ViljamaaiD· 1 shared Argyro Zacharouli· 1 shared Artur MezheyeuskiiD· 1 shared Béla Bozóky· 1 shared

Activity by Year

2021-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersCancer Biology

Mats F. NilssonORCID

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4 papers

Recent·Most cited

TCR clonality and TCR clonal expansion in the in situ microenvironment of non-small cell lung cancer

Hui Yu, Anastasia Magoulopoulou, Rose‐Marie Amini, Maria Paraskevi Chatzinikolaou, Masafumi Horie, Amanda Lindberg, Artur Mezheyeuski, Max Backman, Andreas Metousis, Hans Brunnström, Millaray Marincevic, Johan Botling, Johanna Sofia Margareta Mattsson, Klas Kärre, Karin Leandersson, , Patrick Micke

This study links TCR clonality in NSCLC to genetic mutations, immune phenotypes, immunotherapy response, and patient survival.

Journal for ImmunoTherapy of Cancer · Aug 1, 2025Peer-reviewedCancer Biology

A comprehensive molecular atlas of the cell types in the mouse liver

Riikka S. Pietilä, Guillem Genové, Giuseppe Mocci, Yuyang Miao, Jianping Liu, Stefanos Leptidis, Francesca Del Gaudio, Martin Uhrbom, Elisa Vázquez-Liébanas, Sonja Gustafsson, Byambajav Buyandelger, Elisabeth Raschperger, Johan Björkegren, Emil M. Hansson, Konstantin Gaengel, , Lars Muhl

The paper creates a molecular atlas of mouse liver cell types using single-cell RNA sequencing, revealing new insights into hepatic endothelial and mesenchymal cells and their responses to fibrosis.

bioRxiv · Jan 24, 2025 · PreprintCell Biology

A distinctive tumor compartment in pancreatic lobules defined by nascent stroma and classical tumor cell phenotype

Sara Söderqvist, Annika Viljamaa, Natalie Geyer, Carina Strell, Neda Hekmati, Jennie Engstrand, Ernesto Sparrelid, Caroline Salmén, Rainer L. Heuchel, Argyro Zacharouli, Poya Ghorbani, Sara Harrizi, Yousra Hamidi, Olga Khorosjutina, Stefina Milanova, , Marco Gerling

This study identifies a distinctive PDAC niche in pancreatic lobules characterized by nascent stroma and classical tumor cell phenotype, highlighting the role of acinar-to-ductal metaplasia and microenvironmental factors in tumor progression.

bioRxiv · Mar 14, 2024 · PreprintCancer Biology

PoSTcode: Probabilistic image-based spatial transcriptomics decoder

Milana Gatarić, Jun Sung Park, Tong Li, Vasyl Vaskivskyi, Jessica Svedlund, Carina Strell, Kenny Roberts, Mats F. Nilsson, Lucy R. Yates, Omer Ali Bayraktar, Moritz Gerstung

PoSTcode improves transcript decoding from spatial transcriptomic images by reducing mislabeling and doublet signals.

bioRxiv · Oct 12, 2021 · PreprintBioinformatics