Author

Jérèmie Beguet

Institut National de Recherche pour l'Agriculture, l'Alimentation et l'EnvironnementORCID 0000-0003-4545-931XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Organism:bacteria (other)· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Aymé SporiD· 2 shared Fabrice Albert Martin-LaurentiD· 2 shared Marion Devers‐LamraniiD· 2 shared Amélie PolrotiD· 1 shared Julie AubertiD· 1 shared Mathieu SioliD· 1 shared Nadine Rouard· 1 shared Sana RomdhaneiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersMicrobiology

Aymé SporORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintJun 1, 2026

Deciphering the microbial architecture of pesticide and antibiotics biodegradation

Sylvia Thieffry, Julie Aubert, Jérèmie Beguet…·Aymé Spor

The paper investigates microbial community composition and its relationship to biodegradation potential, finding that presence/absence data and machine learning models improve prediction of mineralisation.

1 citation

metagenomicsstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintMay 6, 2024

Generic workflow for a rapid and easy design of strain-specific PCR and qPCR primers, applied to the assessment of bacterial strains survival in soil

Amélie Polrot, Jérèmie Beguet, Marion Devers‐Lamrani…·Aymé Spor

The paper introduces a web-based workflow for designing strain-specific PCR/qPCR primers using microbial genomes, applied to assess Bacillus strain survival in soil.

1 citation

bacteria (other)metagenomics

𝕏 PostBluesky