Author

Tareian A. Cazares

Cincinnati Children's Hospital Medical CenterORCID 0000-0003-4624-6156Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:gene regulatory network inference· 2 Assay:ATAC-seq· 1 Approach:Bayesian inference· 1 Assay:ChIP-seq· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Emily R. MiraldiiD· 3 shared Leah Claire KottyaniD· 3 shared Matthew T. WeirauchiD· 3 shared Sreeja ParameswaraniD· 3 shared Xiaoting CheniD· 3 shared Joseph A. Wayman· 2 shared Omer A. DonmeziD· 2 shared Andrew W. Dangel· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersBioinformatics

Emily R. MiraldiORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedJan 31, 2023

maxATAC: genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks

Tareian A. Cazares, Faiz W. Rizvi, Balaji Iyer…·Emily R. Miraldi

maxATAC provides deep learning models for predicting transcription factor binding sites from ATAC-seq data, improving prediction in primary and single-cell contexts.

44 citationstop 5%

humanATAC-seq

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GeneticsbioRxivPreprintOct 19, 2022

High-resolution promoter interaction analysis implicates genes involved in the activation of Type 3 Innate Lymphoid Cells in autoimmune disease risk

Valeriya Malysheva, Helen F. Ray-Jones, Nora Lakes…·Mikhail Spivakov

The paper maps promoter interactions in human ILC3s using PCHi-C and links GWAS risk variants to target genes, identifying new autoimmune disease risk genes.

3 citations

humanChIP-seq

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GenomicsNature CommunicationsPeer-reviewedMar 12, 2021

Genome-wide discovery of lupus genetic risk variant allelic regulatory activity

Xiaoming Lu, Xiaoting Chen, Carmy R. Forney…·Leah Claire Kottyan

The paper identifies 482 SLE risk variants with enhancer activity and characterizes allelic regulatory mechanisms at 27 risk loci using MPRA.

81 citationstop 1%

humanDNA methylation

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