Author

Yuwei Yang

Tongji UniversityORCID 0000-0003-4698-1855Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:bacteria (other)· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:fungi (other)· 1 Approach:large language model· 1 Assay:metagenomics· 1

Frequent Co-Authors

Na JiaoiD· 2 shared Ruixin ZhuiD· 2 shared Tingjun XuiD· 2 shared Guoping ZhaoiD· 1 shared Guoqing ZhangiD· 1 shared Jiqing LiiD· 1 shared Liwen TaoiD· 1 shared Lixin ZhuiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersSynthetic Biology

Na JiaoORCID

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2 papers

Recent·Most cited

Synthetic BiologybioRxivPreprintMar 2, 2025

DeepSeMS: a large language model reveals hidden biosynthetic potential of the global ocean microbiome

Tingjun Xu, Yuwei Yang, Ruixin Zhu…·Na Jiao

DeepSeMS uses a large language model to predict chemical structures of secondary metabolites from microbial gene clusters, outperforming existing methods and discovering novel compounds in the ocean microbiome.

2 citations

DNA methylationwhole-genome sequencing

𝕏 PostBluesky

GenomicsmSystemsPeer-reviewedDec 17, 2024

Systematic identification of secondary bile acid production genes in global microbiome

Yuwei Yang, Wenxing Gao, Ruixin Zhu…·Na Jiao

The paper systematically identifies secondary bile acid production genes across microbial genomes and highlights their associations with diseases.

18 citations

bacteria (other)fungi (other)

𝕏 PostBluesky