Meenu Bhati

The paper presents high-quality genome assemblies for five African cattle breeds using PacBio HiFi sequencing, achieving high contiguity and completeness.

The paper identifies 41k regulatory loci in cattle reproductive tissues linked to male fertility by analyzing gene expression and splicing variation across testis, epididymis, and vas deferens.

The paper compares three pangenome construction methods, showing their impact on variant representation and analysis in a bovine super-pangenome.

This study uses SNP data to analyze the ancestry and divergent selection signatures in Ghurrah pigs, revealing introgression from Asian and European breeds and selection in traits like meat quality and olfaction.

This study compares the impact of two cattle reference genomes on genomic analyses, finding negligible differences in most tasks but significant effects on selection signature detection.

The paper characterizes a haplotype-reference panel for low-pass sequencing genotyping in Swiss Large White pigs, showing high concordance with microarray genotypes and significant genetic differentiation between lines.

This study uses whole-genome sequencing of 49 Original Braunvieh cattle ancestors to assess genomic diversity, inbreeding, and selection signatures, finding higher diversity and lower inbreeding compared to European breeds.