Author

Masato Tsutsui

Japan Tobacco (Japan)ORCID 0009-0000-0205-9709Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Approach:large language model· 1

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Kiwamu Arakane· 1 shared Okada MarikoiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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2 top collaborators · 1 mutual co-author link

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1 shared paperBioinformatics

Kiwamu Arakane

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1 paper

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedFeb 25, 2026

Literature-derived, context-aware gene regulatory networks improve biological predictions and mathematical modeling

Masato Tsutsui, Kiwamu Arakane, Okada Mariko

The paper develops a framework to assign context-dependent weights to gene regulations from literature, improving biological predictions and mathematical modeling of disease-specific networks.

DOI 10.1093/bioinformatics/btag101

bulk RNA-seqlarge language model

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