Author

Jiong Chen

University of PennsylvaniaORCID 0009-0001-3420-0890Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Organism:mouse· 1 Approach:optimal transport· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Li SheniD· 2 shared Sumita GaraiiD· 2 shared Alan David KaplaniD· 1 shared Duy Anh Duong-TraniD· 1 shared Enrico AmicoiD· 1 shared Frederick H. XuiD· 1 shared Giovanni PetriiD· 1 shared Jingxuan BaoiD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersBioinformatics

Li ShenORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintFeb 6, 2024

QOT: Efficient Computation of Sample Level Distance Matrix from Single-Cell Omics Data through Quantized Optimal Transport

Zexuan Wang, Qipeng Zhan, Shu Yang…·Li Shen

This paper introduces QOT, a method for efficiently computing sample-level distance matrices from single-cell omics data, showing improved accuracy and robustness over existing OT-based approaches.

3 citations

humanmouse

𝕏 PostBluesky

NeuroscienceMathematicsPeer-reviewedJan 31, 2024

Homological landscape of human brain functional sub-circuits

Duy Anh Duong-Tran, Ralph M. Kaufmann, Jiong Chen…·Li Shen

The paper introduces a homological formalism to analyze higher-order properties of human brain functional sub-circuits and identifies task-specific homological differences in brain connectivity.

11 citations

humanstatistical model

𝕏 PostBluesky