Author

Bendix Christian Harms

Universitätsmedizin GöttingenORCID 0009-0001-4742-6776Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:ATAC-seq· 1 Research Focus:benchmarking· 1 Approach:contrastive learning· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Christian IckesiD· 1 shared Cigdem Hazal Timucin· 1 shared Íñigo Vicente-HernándeziD· 1 shared Ivan BogeskiiD· 1 shared Martin HaubrockiD· 1 shared Tim BeißbarthiD· 1 shared Umut AkgüliD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Christian IckesORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintDec 20, 2024

DNA-binding domain-aware classification enables systematic annotation of the regulatory genome

Christian Ickes, Cigdem Hazal Timucin, Bendix Christian Harms…·Martin Haubrock

TFClassPredict is a DNABERT-based framework that classifies DNA-binding domains to annotate regulatory elements, outperforming existing methods and enabling lineage-specific TF program reconstruction.

DOI 10.1101/2024.12.20.629625

humanATAC-seq

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