HyARQ: a Snakemake workflow for allele-specific read counting and quality control in F1 hybrids
Sontosh K. Deb, Sarah Siegle, Joseph L. Gage
HyARQ is a Snakemake workflow for allele-specific read counting and quality control across multiple assays in F1 hybrids, showing accurate recovery of parental proportions.
bioRxiv · Oct 19, 2026 · PreprintBioinformatics