Author

Ahmet G Genc

University of ReadingORCID 0009-0001-7195-9353Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:protein structure· 2 Research Focus:protein structure prediction· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Approach:deep learning· 1

Frequent Co-Authors

Liam James McGuffiniD· 2 shared Nicholas S. EdmundsiD· 2 shared Recep AdiyamaniD· 1 shared Shuaa M. A. Alharbi· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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2 shared papersBioinformatics

Liam James McGuffinORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintDec 15, 2023

Benchmarking of AlphaFold2 accuracy self-estimates as empirical quality measures and model ranking indicators and their comparison with independent model quality assessment programs.

Nicholas S. Edmunds, Ahmet G Genc, Liam James McGuffin

This paper benchmarks AlphaFold2's self-estimates (plDDT, pTM) against independent quality assessment programs and evaluates their reliability for tertiary and quaternary structure models.

1 citation

protein structurestatistical model

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BioinformaticsbioRxivPreprintDec 6, 2022

Improvement of protein tertiary and quaternary structure predictions using the ReFOLD4 refinement method and the AlphaFold2 recycling process

Recep Adiyaman, Nicholas S. Edmunds, Ahmet G Genc…·Liam James McGuffin

The paper improves protein structure predictions by combining ReFOLD4 and AlphaFold2 recycling, enhancing model accuracy and conformational landscape representation.

1 citation

protein structuredeep learning

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